STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158674cAMP responsive element binding protein 1. (315 aa)    
Predicted Functional Partners:
LOC101166594
Ribosomal protein S6 kinase.
   
 0.958
adcy9
CREB binding protein b.
   
 0.938
LOC101163392
CREB binding protein a.
   
 0.938
LOC101160197
E1A binding protein p300 a.
   
 0.920
LOC101168870
E1A binding protein p300 b.
   
 0.920
LOC101160964
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.727
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.727
LOC101163742
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
    
 0.727
LOC101170876
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.727
atf4
BZIP domain-containing protein.
    
 0.633
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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