Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101160447 | LOC101162517 | ENSORLP00000038127 | ENSORLP00000002939 | RAN binding protein 2. | Bicaudal D homolog 2 (Drosophila). | 0.912 |
LOC101160447 | RAB41 | ENSORLP00000038127 | ENSORLP00000036989 | RAN binding protein 2. | Uncharacterized protein. | 0.639 |
LOC101160447 | rab6b | ENSORLP00000038127 | ENSORLP00000034791 | RAN binding protein 2. | Uncharacterized protein. | 0.639 |
LOC101162517 | LOC101160447 | ENSORLP00000002939 | ENSORLP00000038127 | Bicaudal D homolog 2 (Drosophila). | RAN binding protein 2. | 0.912 |
LOC101162517 | LOC101162870 | ENSORLP00000002939 | ENSORLP00000031330 | Bicaudal D homolog 2 (Drosophila). | Dynactin 1a. | 0.764 |
LOC101162517 | LOC101164165 | ENSORLP00000002939 | ENSORLP00000004566 | Bicaudal D homolog 2 (Drosophila). | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.719 |
LOC101162517 | LOC101166919 | ENSORLP00000002939 | ENSORLP00000037337 | Bicaudal D homolog 2 (Drosophila). | Dynactin 1b. | 0.764 |
LOC101162517 | RAB41 | ENSORLP00000002939 | ENSORLP00000036989 | Bicaudal D homolog 2 (Drosophila). | Uncharacterized protein. | 0.652 |
LOC101162517 | dctn2 | ENSORLP00000002939 | ENSORLP00000006746 | Bicaudal D homolog 2 (Drosophila). | Dynactin 2 (p50). | 0.835 |
LOC101162517 | dync1li2 | ENSORLP00000002939 | ENSORLP00000006871 | Bicaudal D homolog 2 (Drosophila). | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.719 |
LOC101162517 | exd1 | ENSORLP00000002939 | ENSORLP00000029159 | Bicaudal D homolog 2 (Drosophila). | 3'-5' exonuclease domain-containing protein. | 0.697 |
LOC101162517 | fam193b | ENSORLP00000002939 | ENSORLP00000008367 | Bicaudal D homolog 2 (Drosophila). | Family with sequence similarity 193 member B. | 0.660 |
LOC101162517 | rab6b | ENSORLP00000002939 | ENSORLP00000034791 | Bicaudal D homolog 2 (Drosophila). | Uncharacterized protein. | 0.652 |
LOC101162870 | LOC101162517 | ENSORLP00000031330 | ENSORLP00000002939 | Dynactin 1a. | Bicaudal D homolog 2 (Drosophila). | 0.764 |
LOC101162870 | LOC101164165 | ENSORLP00000031330 | ENSORLP00000004566 | Dynactin 1a. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.858 |
LOC101162870 | RAB41 | ENSORLP00000031330 | ENSORLP00000036989 | Dynactin 1a. | Uncharacterized protein. | 0.555 |
LOC101162870 | dctn2 | ENSORLP00000031330 | ENSORLP00000006746 | Dynactin 1a. | Dynactin 2 (p50). | 0.977 |
LOC101162870 | dync1li2 | ENSORLP00000031330 | ENSORLP00000006871 | Dynactin 1a. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.858 |
LOC101162870 | rab6b | ENSORLP00000031330 | ENSORLP00000034791 | Dynactin 1a. | Uncharacterized protein. | 0.555 |
LOC101164165 | LOC101162517 | ENSORLP00000004566 | ENSORLP00000002939 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Bicaudal D homolog 2 (Drosophila). | 0.719 |
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