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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pno1RNA-binding protein PNO1; Positively regulates dimethylation of two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA. Belongs to the PNO1 family. (243 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30.
   
 0.991
nob1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.989
bysl
Bystin-like.
   
 0.987
tsr1
TSR1 ribosome maturation factor.
   
 0.980
ltv1
LTV1 ribosome biogenesis factor.
   
 0.979
riok2
RIO domain-containing protein.
   
 0.973
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.957
aatf
Apoptosis antagonizing transcription factor.
   
 
 0.946
rps9
Ribosomal protein S9.
   
 0.946
LOC101167684
PWP2 small subunit processome component.
   
 
 0.939
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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