Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
prdm10PR domain containing 10. (1148 aa)    
Predicted Functional Partners:
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.770
psmd8
Proteasome 26S subunit, non-ATPase 8.
     
 0.668
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
 
 0.646
osgepl1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.
      
 0.634
LOC101164500
PR domain containing 8.
    
 0.614
psmd3
Proteasome 26S subunit, non-ATPase 3.
    
 0.610
znhit2
Zinc finger, HIT-type containing 2.
    
 
 0.607
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.605
dkc1
Dyskeratosis congenita 1, dyskerin.
    
 0.578
fbl
Fibrillarin.
    
 
 0.577
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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