Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101172026Lecithin retinol acyltransferase b, tandem duplicate 2. (226 aa)    
Predicted Functional Partners:
rpe65
Retinoid isomerohydrolase RPE65 a.
     
 0.910
LOC101163729
Retinoid isomerohydrolase RPE65 b.
     
 0.910
rdh5
Retinol dehydrogenase 5 (11-cis/9-cis); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
  0.905
retsat
Retinol saturase (all-trans-retinol 13,14-reductase).
     
 0.904
LOC101162403
Si:ch1073-13h15.3.
     
 0.904
cyp26a1
Cytochrome P450 26A1; Belongs to the cytochrome P450 family.
    
 0.904
LOC101173846
Uncharacterized protein.
     
 0.904
LOC101162811
Lecithin retinol acyltransferase a.
  
  
 
0.903
LOC101170667
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.902
sdr16c5
Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.902
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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