STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCSTAMPDendrocyte expressed seven transmembrane protein. (479 aa)    
Predicted Functional Partners:
LOC101164317
BZIP domain-containing protein.
    
 0.685
ocstamp
Osteoclast stimulatory transmembrane protein.
      
0.665
LOC101161493
Nuclear factor of activated T cells 1.
      
 0.603
nfatc1
RHD domain-containing protein.
      
 0.603
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
      
 0.580
LOC101164922
Cathepsin K; Belongs to the peptidase C1 family.
      
 0.559
LOC101160005
Cathepsin S, ortholog 1; Belongs to the peptidase C1 family.
      
 0.553
os9
OS9 endoplasmic reticulum lectin.
    
 
 0.474
LOC101171479
cAMP responsive element binding protein 3-like 3a.
    
 0.466
LOC105356229
BZIP domain-containing protein.
    
 0.466
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.