STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcl9lBcl9 like. (1447 aa)    
Predicted Functional Partners:
lef1
Lymphoid enhancer-binding factor 1.
     
  0.709
tcf7
Transcription factor 7.
     
  0.709
tcf7l1
HMG box domain-containing protein.
     
 0.653
LOC111948314
HMG box domain-containing protein.
     
 0.653
tcf7l2
Transcription factor 7 like 2.
     
 0.653
LOC101173182
BCL9 transcription coactivator.
     
0.598
ctnnb1
Catenin (cadherin-associated protein), beta 1.
     
 0.483
tnfrsf19
Tumor necrosis factor receptor superfamily, member 19.
      
 0.478
LOC101159202
Pygopus homolog 2 (Drosophila).
     
 0.459
LOC101171502
Uncharacterized protein.
     
 0.412
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.