STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LAY8_ORYLAUNC80 domain-containing protein. (259 aa)    
Predicted Functional Partners:
nalcn
Sodium leak channel, non-selective.
   
 0.983
Unc79
Uncharacterized protein.
   
 0.982
FAM155A
Family with sequence similarity 155 member A.
    
 
 0.758
LOC101175225
Family with sequence similarity 155 member A.
    
 
 0.758
gk5
Glycerol kinase 5; Belongs to the FGGY kinase family.
    
 
 0.554
LOC101160447
RAN binding protein 2.
   
 0.541
LOC101157195
Neurotensin.
      
 0.502
Tep1
Uncharacterized protein.
   
 0.468
ENSORLP00000040907
TROVE domain-containing protein.
   
 0.468
ENSORLP00000041818
Uncharacterized protein.
   
 0.468
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.