Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H2LAY8_ORYLAUNC80 domain-containing protein. (259 aa)    
Predicted Functional Partners:
nalcn
Sodium leak channel, non-selective.
   
 0.999
Unc79
Uncharacterized protein.
   
 0.994
timmdc1
Translocase of inner mitochondrial membrane domain containing 1.
    
   0.894
FAM155A
Family with sequence similarity 155 member A.
    
 
 0.835
LOC101175225
Family with sequence similarity 155 member A.
    
 
 0.835
LOC101157195
Neurotensin.
      
 0.683
tac1
Uncharacterized protein.
      
 0.601
gk5
Glycerol kinase 5; Belongs to the FGGY kinase family.
    
 0.589
PRDM15
PR/SET domain 15.
    
 0.519
cpsf1
Cleavage and polyadenylation specific factor 1.
    
  0.501
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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