STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC24Leucine rich repeat containing 24. (633 aa)    
Predicted Functional Partners:
LOC101167823
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
      
 0.692
LOC101165919
Polymeric immunoglobulin receptor.
    
 0.528
LOC101166285
Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family.
    
 
 0.478
LOC101160739
Isotocin; Belongs to the vasopressin/oxytocin family.
      
 0.466
piga
Phosphatidylinositol glycan anchor biosynthesis, class A.
     
 0.424
tonsl
Tonsoku-like, DNA repair protein.
    
 0.414
abhd4
Abhydrolase domain containing 4.
    
 
 0.409
ENSORLP00000030683
IGv domain-containing protein.
    
 0.408
unc5b
Unc-5 netrin receptor B.
    
 0.402
dlg3
Discs, large homolog 3 (Drosophila); Belongs to the MAGUK family.
    
 0.401
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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