STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35c2Solute carrier family 35 member C2. (362 aa)    
Predicted Functional Partners:
H2L989_ORYLA
Uncharacterized protein.
 
      0.871
slc35e3
Solute carrier family 35 member E3.
      
 0.848
slc38a6
Solute carrier family 38 member 6.
   
 
 0.764
slc35c1
Solute carrier family 35 member C1.
   
  
 0.739
slc35b4
Solute carrier family 35 member B4.
      
 0.728
slc35a5
Solute carrier family 35 member A5.
   
  
 0.716
SLC35D3
Solute carrier family 35 member D3.
   
  
 0.700
slc35b3
Solute carrier family 35 member B3.
      
 0.694
fpgt
Fucose-1-phosphate guanylyltransferase.
      
 0.694
gmds
GDP-mannose 4,6-dehydratase.
   
  
 0.691
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.