LOC101155125 protein (Oryzias latipes) - STRING interaction network

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Score

LOC101155125

Uncharacterized protein. (386 aa)

Predicted Functional Partners:

dcp1a

0.698

snrpc

0.651

u2af2

0.639

PABPN1L

0.631

pabpn1

0.619

g3bp1

0.615

atxn2

0.608

snrpd2

0.582

cstf3

0.574

pcf11

0.566

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101155125	PABPN1L	ENSORLP00000003146	ENSORLP00000032976	Uncharacterized protein.	RRM domain-containing protein.	0.631
LOC101155125	atxn2	ENSORLP00000003146	ENSORLP00000030523	Uncharacterized protein.	Ataxin 2.	0.608
LOC101155125	cstf3	ENSORLP00000003146	ENSORLP00000012250	Uncharacterized protein.	Cleavage stimulation factor, 3' pre-RNA, subunit 3.	0.574
LOC101155125	dcp1a	ENSORLP00000003146	ENSORLP00000004243	Uncharacterized protein.	Decapping mRNA 1A.	0.698
LOC101155125	g3bp1	ENSORLP00000003146	ENSORLP00000014306	Uncharacterized protein.	GTPase activating protein (SH3 domain) binding protein 1.	0.615
LOC101155125	pabpn1	ENSORLP00000003146	ENSORLP00000039508	Uncharacterized protein.	Poly(A) binding protein, nuclear 1.	0.619
LOC101155125	pcf11	ENSORLP00000003146	ENSORLP00000017214	Uncharacterized protein.	PCF11 cleavage and polyadenylation factor subunit.	0.566
LOC101155125	snrpc	ENSORLP00000003146	ENSORLP00000009164	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.651
LOC101155125	snrpd2	ENSORLP00000003146	ENSORLP00000043777	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.582
LOC101155125	u2af2	ENSORLP00000003146	ENSORLP00000014464	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.639
PABPN1L	LOC101155125	ENSORLP00000032976	ENSORLP00000003146	RRM domain-containing protein.	Uncharacterized protein.	0.631
PABPN1L	cstf3	ENSORLP00000032976	ENSORLP00000012250	RRM domain-containing protein.	Cleavage stimulation factor, 3' pre-RNA, subunit 3.	0.728
PABPN1L	pabpn1	ENSORLP00000032976	ENSORLP00000039508	RRM domain-containing protein.	Poly(A) binding protein, nuclear 1.	0.905
PABPN1L	pcf11	ENSORLP00000032976	ENSORLP00000017214	RRM domain-containing protein.	PCF11 cleavage and polyadenylation factor subunit.	0.761
PABPN1L	u2af2	ENSORLP00000032976	ENSORLP00000014464	RRM domain-containing protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.799
atxn2	LOC101155125	ENSORLP00000030523	ENSORLP00000003146	Ataxin 2.	Uncharacterized protein.	0.608
atxn2	dcp1a	ENSORLP00000030523	ENSORLP00000004243	Ataxin 2.	Decapping mRNA 1A.	0.605
atxn2	g3bp1	ENSORLP00000030523	ENSORLP00000014306	Ataxin 2.	GTPase activating protein (SH3 domain) binding protein 1.	0.846
cstf3	LOC101155125	ENSORLP00000012250	ENSORLP00000003146	Cleavage stimulation factor, 3' pre-RNA, subunit 3.	Uncharacterized protein.	0.574
cstf3	PABPN1L	ENSORLP00000012250	ENSORLP00000032976	Cleavage stimulation factor, 3' pre-RNA, subunit 3.	RRM domain-containing protein.	0.728