Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mpzMyelin protein zero. (251 aa)    
Predicted Functional Partners:
egr2
Early growth response 2b.
    
 
 0.770
LOC101171500
Proteolipid protein 1a.
   
  
 0.691
rabac1
PRA1 family protein.
      
 0.680
mbp
Myelin basic protein b.
   
  
 0.679
LOC101157800
Proteolipid protein 1b.
   
  
 0.673
sh3tc2
SH3 domain and tetratricopeptide repeats 2.
      
 0.601
H2M7X1_ORYLA
LITAF domain-containing protein.
      
 0.597
ENSORLP00000041409
LITAF domain-containing protein.
      
 0.597
ppp2r5b
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
      
 0.578
gdap1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
      
 0.565
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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