Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2LBE3_ORYLAC2 domain-containing protein. (313 aa)    
Predicted Functional Partners:
ENSORLP00000026521
Uncharacterized protein.
 
 
0.915
H2L8K4_ORYLA
Regulating synaptic membrane exocytosis 1a.
 
      0.899
ENSORLP00000028044
PDZ domain-containing protein.
 
      0.744
LOC105355399
Si:ch211-105f12.2.
    
 0.631
tspoap1
Uncharacterized protein.
    
 0.631
Rimbp2
RIMS binding protein 2.
    
 0.631
ENSORLP00000035540
Uncharacterized protein.
    
 0.631
LOC101174933
Uncharacterized protein.
    
 0.631
unc13a
Uncharacterized protein.
   
 0.609
UNC13C
Unc-13 homolog C.
   
 0.609
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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