STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc16DnaJ (Hsp40) homolog, subfamily C, member 16. (788 aa)    
Predicted Functional Partners:
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
 0.627
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.624
dnajc27
DnaJ (Hsp40) homolog, subfamily C, member 27.
   
 0.623
hspa5
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.623
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.604
dnajc8
DnaJ (Hsp40) homolog, subfamily C, member 8.
      
 0.601
hspa4
Heat shock protein 4b.
  
 0.586
hspa4l
Heat shock protein 4 like.
  
 0.586
LOC101166977
Heat shock protein 4a.
  
 0.586
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.579
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.