STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167517Keratin 97; Belongs to the intermediate filament family. (426 aa)    
Predicted Functional Partners:
Unc79
Uncharacterized protein.
   
 0.800
ppl
Periplakin.
   
 0.567
ENSORLP00000039022
Plectin b.
   
 0.557
LOC101160251
Plectin a.
   
 0.556
LOC101160447
RAN binding protein 2.
   
 0.544
LOC101168366
Keratin 8; Belongs to the intermediate filament family.
  
0.516
LOC101172973
Keratin 4; Belongs to the intermediate filament family.
  
0.503
evpl
Envoplakin a.
   
 0.502
LOC101167707
Keratin 5; Belongs to the intermediate filament family.
  
0.484
Tep1
Uncharacterized protein.
   
 0.468
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.