STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccr7Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family. (407 aa)    
Predicted Functional Partners:
LOC101170597
SCY domain-containing protein.
     
  0.900
LOC101162278
Chemokine (C-C motif) ligand 25b.
   
 0.766
a-sdf1a
Chemokine (C-X-C motif) ligand 12a; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.704
LOC101163549
Uncharacterized protein.
    
 0.680
hlx
H2.0-like homeo box 1 (Drosophila).
      
 0.674
cxcl12
Chemokine (C-X-C motif) ligand 12b; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.637
LOC101167902
Tyrosine-protein kinase.
   
 
 0.576
arhgef2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
     
 0.568
cxcr5
Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.
     
0.562
znf148
Zinc finger protein 148.
   
  
 0.562
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.