STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acot9Acyl-CoA thioesterase 9, tandem duplicate 2. (432 aa)    
Predicted Functional Partners:
APOO
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
   
  
 0.813
LOC101172604
Thioesterase superfamily member 4.
     
 0.681
cryl1
Crystallin, lambda 1.
  
 
 0.671
etfa
Electron transfer flavoprotein subunit alpha.
    
 0.656
LOC101166157
Peroxiredoxin 4.
  
  
 0.644
hadh
Hydroxyacyl-CoA dehydrogenase.
  
 
 0.607
acot13
Acyl-CoA thioesterase 13.
   
 
 0.604
itga9
Integrin, alpha 9; Belongs to the integrin alpha chain family.
   
  
 0.583
etfb
Electron transfer flavoprotein subunit beta.
    
  0.559
LOC105358390
Uncharacterized protein.
  
 
 0.519
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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