Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
acot9Acyl-CoA thioesterase 9, tandem duplicate 2. (432 aa)    
Predicted Functional Partners:
zc4h2
Zinc finger, C4H2 domain containing.
    
   0.877
APOO
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.827
acot13
Acyl-CoA thioesterase 13.
     
 0.781
LOC101166157
Peroxiredoxin 4.
  
  
 0.746
c5h12orf10
Melanocyte proliferating gene 1.
   
   0.718
cd36
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
      
 0.705
acot8
Acyl-CoA thioesterase 8.
   
  
 0.700
cryl1
Crystallin, lambda 1.
  
 
 0.684
etfa
Electron transfer flavoprotein subunit alpha.
    
 0.678
LOC105358390
Uncharacterized protein.
  
 
 0.659
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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