STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158354Oxysterol-binding protein; Belongs to the OSBP family. (470 aa)    
Predicted Functional Partners:
ENSORLP00000036222
ANK_REP_REGION domain-containing protein.
 
   
  0.860
rab7a
Uncharacterized protein.
    
 0.694
LOC101157689
RAB7a, member RAS oncogene family.
    
 0.694
mospd2
Motile sperm domain containing 2.
    
 
 0.615
LOC101172996
Rab interacting lysosomal protein.
   
 0.555
LOC101175629
Adhesion regulating molecule 1.
 
    
 0.545
LOC101171004
RPN13_C domain-containing protein.
 
    
 0.521
RILPL1
Rab interacting lysosomal protein like 1.
   
 0.507
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.