Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H2LBV2_ORYLA | H2MT00_ORYLA | ENSORLP00000003381 | ENSORLP00000021893 | RRM domain-containing protein. | PWI domain-containing protein. | 0.715 |
H2LBV2_ORYLA | H2N0H8_ORYLA | ENSORLP00000003381 | ENSORLP00000024888 | RRM domain-containing protein. | RRM domain-containing protein. | 0.662 |
H2LBV2_ORYLA | LOC100049528 | ENSORLP00000003381 | ENSORLP00000026065 | RRM domain-containing protein. | Serine and arginine rich splicing factor 2a. | 0.671 |
H2LBV2_ORYLA | LOC101155211 | ENSORLP00000003381 | ENSORLP00000000917 | RRM domain-containing protein. | Serine and arginine rich splicing factor 7a. | 0.703 |
H2LBV2_ORYLA | LOC101163660 | ENSORLP00000003381 | ENSORLP00000001513 | RRM domain-containing protein. | RRM domain-containing protein. | 0.671 |
H2LBV2_ORYLA | SRSF3 | ENSORLP00000003381 | ENSORLP00000030760 | RRM domain-containing protein. | Serine and arginine rich splicing factor 3b. | 0.662 |
H2LBV2_ORYLA | pnisr | ENSORLP00000003381 | ENSORLP00000040200 | RRM domain-containing protein. | PNN-interacting serine/arginine-rich protein. | 0.696 |
H2LBV2_ORYLA | rnps1 | ENSORLP00000003381 | ENSORLP00000038148 | RRM domain-containing protein. | RNA binding protein S1, serine-rich domain. | 0.664 |
H2LBV2_ORYLA | srsf10 | ENSORLP00000003381 | ENSORLP00000009635 | RRM domain-containing protein. | Serine and arginine rich splicing factor 10. | 0.662 |
H2LBV2_ORYLA | zranb2 | ENSORLP00000003381 | ENSORLP00000008191 | RRM domain-containing protein. | Zinc finger, RAN-binding domain containing 2. | 0.679 |
H2MT00_ORYLA | H2LBV2_ORYLA | ENSORLP00000021893 | ENSORLP00000003381 | PWI domain-containing protein. | RRM domain-containing protein. | 0.715 |
H2MT00_ORYLA | H2N0H8_ORYLA | ENSORLP00000021893 | ENSORLP00000024888 | PWI domain-containing protein. | RRM domain-containing protein. | 0.720 |
H2MT00_ORYLA | LOC100049528 | ENSORLP00000021893 | ENSORLP00000026065 | PWI domain-containing protein. | Serine and arginine rich splicing factor 2a. | 0.779 |
H2MT00_ORYLA | LOC101155211 | ENSORLP00000021893 | ENSORLP00000000917 | PWI domain-containing protein. | Serine and arginine rich splicing factor 7a. | 0.641 |
H2MT00_ORYLA | LOC101163660 | ENSORLP00000021893 | ENSORLP00000001513 | PWI domain-containing protein. | RRM domain-containing protein. | 0.779 |
H2MT00_ORYLA | SRSF3 | ENSORLP00000021893 | ENSORLP00000030760 | PWI domain-containing protein. | Serine and arginine rich splicing factor 3b. | 0.720 |
H2MT00_ORYLA | rnps1 | ENSORLP00000021893 | ENSORLP00000038148 | PWI domain-containing protein. | RNA binding protein S1, serine-rich domain. | 0.959 |
H2N0H8_ORYLA | H2LBV2_ORYLA | ENSORLP00000024888 | ENSORLP00000003381 | RRM domain-containing protein. | RRM domain-containing protein. | 0.662 |
H2N0H8_ORYLA | H2MT00_ORYLA | ENSORLP00000024888 | ENSORLP00000021893 | RRM domain-containing protein. | PWI domain-containing protein. | 0.720 |
H2N0H8_ORYLA | LOC100049528 | ENSORLP00000024888 | ENSORLP00000026065 | RRM domain-containing protein. | Serine and arginine rich splicing factor 2a. | 0.906 |
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