STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
olgc6Guanylate cyclase. (1075 aa)    
Predicted Functional Partners:
LOC101159879
Uncharacterized protein.
   
 0.998
LOC101159096
Uncharacterized protein.
   
 0.977
entpd1
Ectonucleoside triphosphate diphosphohydrolase 1; Belongs to the GDA1/CD39 NTPase family.
   
 
 0.914
olgc9
Guanylate cyclase.
  
  
0.903
nudt2
Nudix (nucleoside diphosphate linked moiety X)-type motif 2.
     
  0.900
mocs1
Molybdenum cofactor synthesis 1.
   
 
 0.847
LOC101161367
GTP cyclohydrolase 2.
     
 0.837
pde6c
Phosphodiesterase.
   
 0.818
LOC101169549
Phosphodiesterase.
   
 0.818
LOC101163713
Phosphodiesterase.
   
 0.818
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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