Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
shisal1Shisa like 1b. (194 aa)    
Predicted Functional Partners:
pin4
Peptidyl-prolyl cis-trans isomerase.
      
 0.749
nhsl2
NHS-like 2.
      
 0.747
LOC101174624
Uncharacterized protein.
      
 0.717
cyyr1
Cysteine/tyrosine-rich 1.
      
 0.700
llph
LLP homolog, long-term synaptic facilitation factor.
      
 0.599
shisa3
Shisa family member 3.
      
 0.581
LOC101172297
Uncharacterized protein.
      
 0.535
ARHGAP8
Rho GTPase activating protein 8.
      
 0.535
ercc6
Excision repair cross-complementation group 6.
      
 0.507
fam3c
Family with sequence similarity 3 member C.
      
 0.490
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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