STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem115Transmembrane protein 115. (383 aa)    
Predicted Functional Partners:
mul1
Mitochondrial E3 ubiquitin protein ligase 1b.
   
    0.689
bet1
Bet1 golgi vesicular membrane trafficking protein.
   
 
  0.603
LOC101167651
Mitochondrial E3 ubiquitin protein ligase 1a.
   
    0.593
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
   
 
  0.525
LOC101159261
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
  0.518
CAPZA2
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
  0.518
LOC101175334
Actin related protein 1, centractin.
   
 
  0.508
LOC110017196
Zgc:112496.
   
 
  0.502
LOC101167695
Transmembrane protein 59-like.
   
  
 0.492
stx5
Syntaxin 5A; Belongs to the syntaxin family.
   
 
  0.490
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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