STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162699MAX network transcriptional repressor b. (610 aa)    
Predicted Functional Partners:
MAX
BHLH domain-containing protein.
    
 
 0.811
LOC101172048
Myc associated factor X.
    
 
 0.811
mlx
MAX dimerization protein MLX.
    
 
 0.805
mxd3
MAX dimerization protein 3.
    
 
 0.781
mycn
MYCN proto-oncogene, bHLH transcription factor.
    
 0.625
mxd4
MAX dimerization protein 4.
      
 0.604
crhbp
Corticotropin releasing hormone binding protein.
      
 0.598
myc
BHLH domain-containing protein.
      
 0.574
LOC101157001
Retinal G protein coupled receptor a; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
      
 0.573
tyr
Tyrosinase; This is a copper-containing oxidase that functions in the formation of pigments such as melanins and other polyphenolic compounds.
    
 
 0.544
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.