STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO43F-box protein 43. (588 aa)    
Predicted Functional Partners:
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
   
 0.751
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.726
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 
 0.700
LOC101173617
Malate synthase-like.
   
  
 0.670
fau
40S ribosomal protein S30.
   
 0.644
ERG28
Ergosterol biosynthesis 28 homolog.
    
 
 0.642
plk2
Serine/threonine-protein kinase PLK.
   
 0.640
plk3
Serine/threonine-protein kinase PLK.
   
 0.640
PLK1
Serine/threonine-protein kinase PLK.
   
 0.640
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.597
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.