Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
abhd12Abhydrolase domain containing 12. (375 aa)    
Predicted Functional Partners:
abhd16a
Abhydrolase domain containing 16A.
      
 0.687
abhd4
Abhydrolase domain containing 4.
  
 
 0.655
napepld
N-acyl phosphatidylethanolamine phospholipase D.
     
 0.621
gins1
GINS complex subunit 1 (Psf1 homolog).
      
 0.598
rasl11b
RAS-like, family 11, member B.
     
 0.548
LOC101167454
Abhydrolase domain containing 6b.
  
 
 0.526
abhd6
AB hydrolase-1 domain-containing protein.
  
 
 0.526
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
     
 0.516
lypla2
Lysophospholipase 2.
     
 0.502
lypla1
Lysophospholipase 1.
     
 0.502
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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