LOC101166169 protein (Oryzias latipes) - STRING interaction network

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Score

LOC101166169

Si:ch211-141o9.10. (325 aa)

Predicted Functional Partners:

apex1

0.990

fancm

0.946

ercc1

0.931

ercc4

0.926

ung

0.918

xpa

0.917

nthl1

0.910

rev3l

0.904

rad52

0.865

faap24

0.846

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101166169	apex1	ENSORLP00000003474	ENSORLP00000015494	Si:ch211-141o9.10.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.990
LOC101166169	ercc1	ENSORLP00000003474	ENSORLP00000020313	Si:ch211-141o9.10.	Excision repair cross-complementation group 1.	0.931
LOC101166169	ercc4	ENSORLP00000003474	ENSORLP00000003684	Si:ch211-141o9.10.	Excision repair cross-complementation group 4.	0.926
LOC101166169	faap24	ENSORLP00000003474	ENSORLP00000031997	Si:ch211-141o9.10.	FA core complex associated protein 24.	0.846
LOC101166169	fancm	ENSORLP00000003474	ENSORLP00000018174	Si:ch211-141o9.10.	Uncharacterized protein.	0.946
LOC101166169	nthl1	ENSORLP00000003474	ENSORLP00000014640	Si:ch211-141o9.10.	Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family.	0.910
LOC101166169	rad52	ENSORLP00000003474	ENSORLP00000013189	Si:ch211-141o9.10.	RAD52 homolog, DNA repair protein.	0.865
LOC101166169	rev3l	ENSORLP00000003474	ENSORLP00000018995	Si:ch211-141o9.10.	REV3 like, DNA directed polymerase zeta catalytic subunit.	0.904
LOC101166169	ung	ENSORLP00000003474	ENSORLP00000008939	Si:ch211-141o9.10.	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	0.918
LOC101166169	xpa	ENSORLP00000003474	ENSORLP00000025771	Si:ch211-141o9.10.	Xeroderma pigmentosum, complementation group A.	0.917
apex1	LOC101166169	ENSORLP00000015494	ENSORLP00000003474	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Si:ch211-141o9.10.	0.990
apex1	ercc1	ENSORLP00000015494	ENSORLP00000020313	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Excision repair cross-complementation group 1.	0.835
apex1	ercc4	ENSORLP00000015494	ENSORLP00000003684	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Excision repair cross-complementation group 4.	0.861
apex1	nthl1	ENSORLP00000015494	ENSORLP00000014640	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family.	0.987
apex1	rad52	ENSORLP00000015494	ENSORLP00000013189	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	RAD52 homolog, DNA repair protein.	0.488
apex1	rev3l	ENSORLP00000015494	ENSORLP00000018995	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	REV3 like, DNA directed polymerase zeta catalytic subunit.	0.564
apex1	ung	ENSORLP00000015494	ENSORLP00000008939	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	0.919
apex1	xpa	ENSORLP00000015494	ENSORLP00000025771	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Xeroderma pigmentosum, complementation group A.	0.851
ercc1	LOC101166169	ENSORLP00000020313	ENSORLP00000003474	Excision repair cross-complementation group 1.	Si:ch211-141o9.10.	0.931
ercc1	apex1	ENSORLP00000020313	ENSORLP00000015494	Excision repair cross-complementation group 1.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.835