STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNS2BTB domain-containing protein; Belongs to the potassium channel family. (479 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30.
   
  0.817
LOC101175224
Si:dkey-43k4.5; Belongs to the potassium channel family.
    
  0.678
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
   
 0.611
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
   
 0.611
kcnab2
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 a.
   
 0.611
LOC101168654
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 b.
   
 0.611
lrrtm1
Leucine rich repeat transmembrane neuronal 1.
   
 
 0.596
rpl30
Ribosomal protein L30.
   
 0.579
rpl21
Ribosomal protein L21.
   
 0.579
rpl31
Ribosomal protein L31.
   
 0.578
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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