STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM181BFamily with sequence similarity 181 member B. (323 aa)    
Predicted Functional Partners:
ddias
Rep_fac-A_C domain-containing protein.
      
 0.696
tead3
Transcriptional enhancer factor TEF-5; Transcription factor which plays a key role in the Hippo signaling pathway, a pathway involved in organ size control and tumor suppression by restricting proliferation and promoting apoptosis.
    
 
 0.634
lats1
Large tumor suppressor kinase 1.
      
 0.614
LOC101170629
Nucleic acid binding protein 1a.
      
 0.611
pomc
Proopiomelanocortin.
      
 0.512
LOC101172466
Zinc finger protein 219.
      
 0.496
znf536
Zinc finger protein 536.
      
 0.496
ENSORLP00000037570
Uncharacterized protein.
      
 0.496
prcp
Prolylcarboxypeptidase (angiotensinase C).
 
    
 0.482
tead4
YBD domain-containing protein.
    
 
 0.471
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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