Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101168381Neurocalcin delta b. (192 aa)    
Predicted Functional Partners:
chp1
Calcineurin-like EF-hand protein 1.
    
 
 0.755
ntsr1
Neurotensin receptor 1 (high affinity); Belongs to the G-protein coupled receptor 1 family.
   
 
 0.665
LOC101170994
Uncharacterized protein.
      
 0.651
lrrtm1
Leucine rich repeat transmembrane neuronal 1.
   
 0.625
LOC101164503
Ataxin 1b.
   
  
 0.620
pi4kb
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.532
LOC101161567
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 
 0.532
Kcnf1
Potassium voltage-gated channel, subfamily F, member 1a; Belongs to the potassium channel family.
   
 0.522
dld
Dihydrolipoyl dehydrogenase.
      
 0.503
calm3
Calmodulin-A; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
   
 0.494
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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