STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sumf2Sulfatase modifying factor 2. (297 aa)    
Predicted Functional Partners:
cct6a
Chaperonin containing TCP1, subunit 6A (zeta 1).
 
  
 
 0.781
arsa
Arylsulfatase A.
  
 0.778
sumf1
Sulfatase modifying factor 1.
  
 
0.761
arsg
Arylsulfatase G.
  
 0.714
sts
Steroid sulfatase (microsomal), isozyme S.
  
 0.684
LOC101167832
Arylsulfatase H.
  
 0.682
arsk
Arylsulfatase family, member K.
  
 
 0.651
cdk18
Cyclin dependent kinase 18; Belongs to the protein kinase superfamily.
    
 0.636
LOC101172478
Arylsulfatase family, member J.
  
  0.630
LOC101175004
Arylsulfatase family, member Ia.
  
  0.628
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.