Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H2LCK2_ORYLASi:ch1073-303k11.2. (264 aa)    
Predicted Functional Partners:
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
      
 0.498
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.498
LOC101164896
Uncharacterized protein.
  
     0.447
LOC101171200
Embryonal Fyn-associated substrate.
  
 
   0.437
Nufip2
Nuclear FMR1 interacting protein 2.
  
     0.402
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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