STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNIP3Potassium voltage-gated channel interacting protein 3. (265 aa)    
Predicted Functional Partners:
letm2
Leucine zipper-EF-hand containing transmembrane protein 2.
      
 0.827
LOC101165880
BTB domain-containing protein; Belongs to the potassium channel family.
    
 0.650
KCND3
Potassium voltage-gated channel subfamily D member 3; Belongs to the potassium channel family.
    
 0.650
kcnd1
Potassium voltage-gated channel, Shal-related subfamily, member 1; Belongs to the potassium channel family.
    
 0.650
LOC101159502
Potassium voltage-gated channel, Shal-related subfamily, member 3; Belongs to the potassium channel family.
    
 0.650
kcnd2
Potassium voltage-gated channel, Shal-related subfamily, member 2; Belongs to the potassium channel family.
    
 0.650
echs1
Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.559
KCNIP4
Potassium voltage-gated channel interacting protein 4.
     
  0.493
LOC101172563
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.446
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.446
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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