Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
dalrd3DALR anticodon binding domain containing 3. (575 aa)    
Predicted Functional Partners:
gmps
Guanine monophosphate synthase.
  
 0.938
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
  
 0.835
ephx2
AB hydrolase-1 domain-containing protein.
  
 
 0.816
wdr6
WD repeat domain 6.
   
  
 0.773
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.763
smc4
Structural maintenance of chromosomes protein.
  
 0.720
adsl
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.714
mettl6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
    
 
 0.699
piwil2
Uncharacterized protein; Belongs to the argonaute family.
      
 0.688
dazap1
DAZ associated protein 1.
   
 
 0.639
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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