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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nfkb2Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100). (956 aa)    
Predicted Functional Partners:
LOC101158728
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
0.989
LOC101171857
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.972
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.964
nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
  
 
0.922
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
0.920
LOC101162015
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
  
0.901
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
  
0.901
map3k8
Mitogen-activated protein kinase kinase kinase 8.
   
 0.864
REL
REL proto-oncogene, NF-kB subunit.
   
0.824
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.733
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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