Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nfatc4Nuclear factor of activated T cells 4. (806 aa)    
Predicted Functional Partners:
s1pr1
Sphingosine-1-phosphate receptor 1; Belongs to the G-protein coupled receptor 1 family.
     
  0.900
ppp3r1
Uncharacterized protein.
    
 0.868
LOC101168674
Uncharacterized protein.
    
 0.868
cdc25b
Rhodanese domain-containing protein.
      
 0.812
LOC101171005
Nuclear factor of activated T cells 2a.
    
 
 0.771
LOC101172250
Serine/threonine-protein phosphatase.
    
 0.759
LOC101156706
Serine/threonine-protein phosphatase.
    
 0.759
LOC101169815
Serine/threonine-protein phosphatase.
    
 0.759
LOC101168142
Serine/threonine-protein phosphatase.
    
 0.759
pold1
DNA polymerase.
      
 0.747
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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