Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mettl27Methyltransferase like 27. (232 aa)    
Predicted Functional Partners:
bysl
Bystin-like.
   
 0.961
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.956
ltv1
LTV1 ribosome biogenesis factor.
   
 0.955
nob1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.930
tsr1
TSR1 ribosome maturation factor.
   
 0.925
LOC101173946
Uncharacterized protein.
      
 0.914
nop14
NOP14 nucleolar protein homolog (yeast).
   
 
 0.902
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.868
rps13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
  0.851
riok2
RIO domain-containing protein.
   
 
 0.842
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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