STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170468Zgc:163057; Belongs to the globin family. (141 aa)    
Predicted Functional Partners:
LOC101158279
Hemoglobin, beta adult 1; Belongs to the globin family.
  
 0.907
LOC101159018
GLOBIN domain-containing protein; Belongs to the globin family.
  
0.856
gb-4
GLOBIN domain-containing protein; Belongs to the globin family.
  
 
0.856
gb-2
Embryonic beta-type globin; Belongs to the globin family.
  
 
0.814
LOC101170257
Microseminoprotein, beta-like.
    
 0.752
gb-3
GLOBIN domain-containing protein; Belongs to the globin family.
  
 
  0.749
LOC101158529
Beta-type globin; Belongs to the globin family.
  
 
0.735
HBE1
Hemoglobin subunit epsilon 1; Belongs to the globin family.
  
 
0.731
LOC101173088
Cytochrome b5 reductase 4.
   
 0.652
LOC101172398
ELAV-like protein; Belongs to the RRM elav family.
      
 0.587
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.