STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LCW4_ORYLADedicator of cytokinesis 9b; Belongs to the DOCK family. (1218 aa)    
Predicted Functional Partners:
H2MTJ3_ORYLA
DHR-2 domain-containing protein; Belongs to the DOCK family.
 
     0.932
ENSORLP00000045889
Dedicator of cytokinesis 9b; Belongs to the DOCK family.
 
     0.928
H2M781_ORYLA
DHR-2 domain-containing protein; Belongs to the DOCK family.
 
     0.920
ENSORLP00000037676
DHR-2 domain-containing protein; Belongs to the DOCK family.
 
      0.899
CDC42
Cell division cycle 42.
   
 0.711
LOC101164400
Uncharacterized protein.
   
 0.711
LOC101164658
Uncharacterized protein.
   
 0.576
LOC101174454
Uncharacterized protein.
   
 0.576
LOC101175393
Macrophage stimulating 1 receptor a.
   
 
  0.497
met
MET proto-oncogene, receptor tyrosine kinase.
   
 
  0.497
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.