Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101174760Neuropeptide FF receptor 2b; Belongs to the G-protein coupled receptor 1 family. (440 aa)    
Predicted Functional Partners:
npff
Uncharacterized protein.
    
 0.982
LOC101159115
Uncharacterized protein.
     
 0.944
duox1
Dual oxidase.
      
 0.643
H2MR70_ORYLA
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.610
ENSORLP00000044759
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.610
H2LGY1_ORYLA
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.581
LOC101163507
Glutamate receptor, ionotropic, AMPA 4a.
   
 0.576
grm5
Glutamate receptor, metabotropic 5b.
   
 
 0.546
LOC101173805
Glutamate receptor, metabotropic 5a.
   
 
 0.541
arr3
Arrestin_C domain-containing protein.
   
 0.518
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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