Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aqp8Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (258 aa)    
Predicted Functional Partners:
LOC101169443
Aquaporin 7; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.939
LOC105355370
Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
     
 0.914
lcmt1
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
 
 
  
 0.886
arrdc3
Arrestin domain containing 3a.
      
 0.800
AQP4
Aquaporin 4; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
0.770
LOC101163089
Aquaporin 3 (Gill blood group); Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
0.763
aqp1
Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
0.757
LOC101166490
Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
     
 0.751
kank2
KN motif and ankyrin repeat domains 2.
    
 0.730
aqp9
Aquaporin 9b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
0.724
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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