Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101163102Stromal cell-derived factor 2. (226 aa)    
Predicted Functional Partners:
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 
 0.833
LOC101162152
Ras-related GTP binding A.
      
 0.790
creld2
Cysteine-rich with EGF-like domains 2.
   
 
 0.716
hspa5
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 
 0.703
LOC101158289
Sperm associated antigen 1a.
      
 0.693
vdac1
Voltage-dependent anion channel 1.
    
 
 0.683
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 
 0.657
cdc42se2
CDC42 small effector 2.
   
 
 0.656
Spag1
Uncharacterized protein.
      
 0.591
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.591
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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