Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101171685Solute carrier family 25 member 15a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (303 aa)    
Predicted Functional Partners:
nags
N-acetylglutamate synthase.
   
  
 0.750
ca5a
Carbonic anhydrase Va; Belongs to the alpha-carbonic anhydrase family.
      
 0.650
LOC101171114
Arginase.
   
  
 0.504
LOC101162292
Glutaminase 2a (liver, mitochondrial).
      
 0.501
LOC101172912
Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a.
      
 0.501
smim8
Small integral membrane protein 8.
      
 0.480
cfap57
Cilia and flagella associated protein 57.
      
 0.464
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
      
 0.437
LOC101175464
Glutaminase a.
      
 0.429
LOC101158258
Bridging integrator 1b.
 
      0.417
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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