STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101175251MOB kinase activator 1Bb. (217 aa)    
Predicted Functional Partners:
lats1
Large tumor suppressor kinase 1.
    
 0.916
lats2
Large tumor suppressor kinase 2.
    
 0.916
LOC101175466
Uncharacterized protein.
   
 0.905
LOC101155570
Serine/threonine kinase 3 (STE20 homolog, yeast).
   
 0.905
sav1
Salvador family WW domain containing protein 1.
    
 0.806
stk38l
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.785
stk38
Serine/threonine kinase 38a; Belongs to the protein kinase superfamily.
   
 0.785
yap1
Transcriptional coactivator YAP1; Transcriptional regulator which can act both as a coactivator and a corepressor and is the critical downstream regulatory target in the Hippo signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis (By similarity). Plays a key role in tissue tension and 3D tissue shape by regulating cortical actomyosin network formation.
    
 0.749
ppp2ca
Serine/threonine-protein phosphatase.
 
  
 
 0.639
ppp2cb
Serine/threonine-protein phosphatase.
 
  
 
 0.636
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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