Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101172199Methionine sulfoxide reductase B1b. (92 aa)    
Predicted Functional Partners:
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
  
  
 0.616
txn
Thioredoxin; Belongs to the thioredoxin family.
  
 0.582
selenot
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
      
 0.578
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.578
selenok
Selenoprotein K.
      
 0.577
selenoo
Selenoprotein O1.
     
 0.574
selenof
Selenoprotein F.
      
 0.570
LOC101163534
Si:ch1073-358c10.1.
  
 
 0.556
LOC101174315
Methionine sulfoxide reductase A.
  
 
 0.556
LOC101169850
Thioredoxin reductase 3.
  
  
 0.523
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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