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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neurl2Neuralized E3 ubiquitin protein ligase 2. (260 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog b; Belongs to the SKP1 family.
     
 0.680
ELOB
Ubiquitin-like domain-containing protein.
     
 0.646
LOC101161115
TIP120 domain-containing protein.
     
 0.621
cand1
Cullin-associated and neddylation-dissociated 1.
     
 0.621
CUL5
Cullin 5; Belongs to the cullin family.
     
 0.620
LOC101154889
Cullin 5; Belongs to the cullin family.
     
 0.620
ccdc22
Coiled-coil domain containing 22.
     
 0.607
ENSORLP00000027520
Ubiquitin-like domain-containing protein.
    
  0.587
ENSORLP00000045836
Ubiquitin-like domain-containing protein.
    
  0.587
LOC101174590
Uncharacterized protein.
    
 0.505
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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