STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SZT2SZT2 subunit of KICSTOR complex. (2315 aa)    
Predicted Functional Partners:
kptn
Kaptin (actin binding protein).
    
 0.988
c23h12orf66
Si:ch211-125a15.1.
    
 0.988
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
 0.988
wdr59
WD repeat domain 59.
    
 0.979
Depdc5
Uncharacterized protein.
    
 0.974
wdr24
WD repeat domain 24.
    
 0.970
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.969
immp1l
Mitochondrial inner membrane protease subunit.
    
 0.938
nprl3
NPR3-like, GATOR1 complex subunit.
    
 0.930
ENSORLP00000045784
Uncharacterized protein.
    
 0.930
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.