STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrc73Leucine rich repeat containing 73. (316 aa)    
Predicted Functional Partners:
ankrd13d
Ankyrin repeat domain 13 family, member D.
      
 0.870
tbc1d5
TBC1 domain family, member 5.
    
   0.856
tepsin
TEPSIN adaptor related protein complex 4 accessory protein.
      
 0.853
vps26b
VPS26, retromer complex component B.
    
 
 0.772
vsig10
Uncharacterized protein.
      
 0.765
nprl2
NPR2 like, GATOR1 complex subunit.
      
 0.754
polr3h
Polymerase (RNA) III (DNA directed) polypeptide H.
      
 0.742
vps26a
VPS26, retromer complex component A.
    
 
 0.730
c12h9orf16
Expressed sequence BC139872.
      
 0.613
LOC101165978
Uncharacterized protein; Belongs to the DOCK family.
      
 0.564
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.