Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GID4GID complex subunit 4 homolog. (218 aa)    
Predicted Functional Partners:
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
 0.944
GID8
Uncharacterized protein.
    
 0.922
LOC101165057
GID complex subunit 8 homolog b (S. cerevisiae).
    
 0.922
LOC101155246
WD repeat domain 26b.
    
 0.912
LOC101164206
Uncharacterized protein.
    
 0.912
maea
Macrophage erythroblast attacher.
    
 0.909
mkln1
Muskelin 1, intracellular mediator containing kelch motifs.
    
 0.902
ranbp10
Ran binding protein 10.
    
 0.894
ranbp9
Uncharacterized protein.
    
 0.871
gdnf
Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake.
    
   0.713
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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