STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dlk2Delta-like 2 homolog (Drosophila). (347 aa)    
Predicted Functional Partners:
H2LGV0_ORYLA
ANK_REP_REGION domain-containing protein.
 
      0.730
nup62
Nsp1_C domain-containing protein.
    
 0.631
ktn1
Kinectin 1.
   
 0.563
nkain2
Sodium/potassium transporting ATPase interacting 2.
   
  
 0.559
nkain1
Sodium/potassium transporting ATPase interacting 1.
   
  
 0.559
adpgk
ADP-dependent glucokinase.
      
 0.535
LOC101169909
TPR_REGION domain-containing protein.
    
 0.447
ENSORLP00000026162
TPR_REGION domain-containing protein.
    
 0.447
TTC28
Tetratricopeptide repeat domain 28.
    
 0.447
tp53bp1
Tumor protein p53 binding protein, 1.
    
 0.423
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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