Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
LOC101162456Si:ch73-380n15.2. (560 aa)    
Predicted Functional Partners:
LOC101158195
Cholinergic receptor, nicotinic, alpha 4b.
  
 
0.951
LOC101173433
Cholinergic receptor, nicotinic, alpha 5.
  
 
0.951
LOC101155076
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
 
0.951
LOC101162690
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
 
0.950
LOC101168098
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
 
0.950
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
 
0.945
CHRNA1-2
Cholinergic receptor nicotinic alpha 1 subunit.
  
 
0.944
LOC101162933
Cholinergic receptor nicotinic alpha 6 subunit.
  
 
0.943
LOC101163178
Cholinergic receptor, nicotinic, beta 5b.
  
 
0.943
LOC101157251
Cholinergic receptor, nicotinic, beta 1 (muscle).
  
 
0.943
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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